PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_025686-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 227aa    MW: 25316.8 Da    PI: 9.6903
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_025686-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.99.9e-102773251
                   HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS
            HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51
                   r+ h+ +Er RR+ +++ f  L  +lP+a   +  + + ++iL + ++YI
  NNU_025686-RA 27 RERHKLAERERRKSMRELFLSLHAILPHA---NTVRKEQSAILDEIINYI 73
                   899**************************...99***************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.97E-72373No hitNo description
PROSITE profilePS5088811.1412576IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-112595IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-92790IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-72773IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MATAEWGSDW DAAAIDGNPE AGDVNARERH KLAERERRKS MRELFLSLHA ILPHANTVRK  60
EQSAILDEII NYIPIAVARL QALKKRKNSF SPSASSMTKP TVRISNRNSA SSNSTDCIIR  120
LVPEPSSSVA VRLRGDRVNV SLTDIKCDGQ TFLLSAFLDE LEAHHLEPVR STHCRDGSKI  180
LTHSESKIPD GLERSPALLK ERLQELACKL QKLRSNVSLK RSFDQIS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010246747.11e-166PREDICTED: uncharacterized protein LOC104589958
TrEMBLE3WDH23e-99E3WDH2_COPJA; BHLH transcriptional factor
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.16e-07bHLH family protein